plot_catchability_density: Plot the density histogram for the posteriors for...

In pacific-hake/hake-assessment: Stock Assessment for Pacific Hake

Plot the density histogram for the posteriors for catchability for either the acoustic age-2+ survey or the age-1 index

Description

Plot the density histogram for the posteriors for catchability for either the acoustic age-2+ survey or the age-1 index

Usage

plot_catchability_density(
  model,
  model2 = NULL,
  type = c("age2", "age1"),
  num_bins = 30,
  x_breaks = seq(0, 1.4, 0.1),
  y_breaks = seq(0, 3, 0.5),
  bar_outline_color = "black",
  bar_fill = main_fill,
  bar_alpha = main_alpha,
  line_colors = c("green", "red"),
  line_types = c("solid", "solid"),
  line_widths = c(1, 1)
)

Arguments

model	The base model
model2	The second model, typically last year's base model
type	One of "age2" or "age1
num_bins	The number of bins to use for the histogram created using ggplot2::geom_histogram()
x_breaks	A vector of values to show on the x-axis
y_breaks	A vector of values to show on the y-axis
bar_outline_color	The color of the outline of each bar in the histogram
bar_fill	The color of the fill for each bar in the histogram
bar_alpha	The amount of transparency for each bar in the histogram
line_colors	A vector of two line colors, one for the base model (model) median catchability and the second for last year's model (model2)median catchability
line_types	A vector of two line types for the two median lines
line_widths	A vector of two line widths for the two median lines

Value

A ggplot2::ggplot() object

pacific-hake/hake-assessment documentation built on Nov. 8, 2024, 1:16 p.m.