table_ci_posteriors: Make a latex table of credible intervals with columns for...

In pacific-hake/hake-assessment: Stock Assessment for Pacific Hake

Make a latex table of credible intervals with columns for female spawning biomass, relative spawning biomass, total biomass, age 2+ biomass, age-0 recruits, relative fishing intensity, and exploitation fraction. Also output a CSV file with the table contents.

Description

Make a latex table of credible intervals with columns for female spawning biomass, relative spawning biomass, total biomass, age 2+ biomass, age-0 recruits, relative fishing intensity, and exploitation fraction. Also output a CSV file with the table contents.

Usage

table_ci_posteriors(
  model,
  start_yr,
  end_yr,
  scale = 1000,
  digits = 1,
  lower_col = "2.5%",
  upper_col = "97.5%",
  font_size = 10,
  header_font_size = 10,
  header_vert_spacing = 12,
  header_vert_scale = 1.2,
  ...
)

Arguments

model	A model, created by create_rds_file()
start_yr	Start year in table
end_yr	End year in table
scale	Scale factor for biomasses and recruitments
digits	Number of decimal points to show in values in the table
lower_col	Column name in the data frames for the lower ci value
upper_col	Column name in the data frames for the upper ci value
font_size	The table data and header font size in points
header_font_size	The font size for the headers only. If NULL, the headers will have the same font size as the table cell data
header_vert_scale	Scale factor to create the vertical spacing value. See header_vert_spacing
...	Arguments passed to knitr::kable()
csv_dir	Directory for CSV output
vert_spacing	The vertical spacing between newlines for this font. If NULL this will be calculated as header_font_size * header_vert_scale

Value

An knitr::kable() object

pacific-hake/hake-assessment documentation built on Jan. 14, 2025, 9:12 p.m.