reaction: Create reaction objects

In paleolimbot/chemr: R Data Structures for Chemistry Data

Description

Create reaction objects

Usage

reaction(lhs, rhs, counts_lhs = 1, counts_rhs = 1, log_k = NA_real_,
  validate = TRUE)

reaction_list(..., validate = TRUE)

as_reaction(x, ...)

as.reaction(x, ...)

## S3 method for class 'reaction'
as_reaction(x, ...)

## S3 method for class 'mol'
as_reaction(x, coefficient = rep_len(1, length(x)),
  log_k = NA_real_, validate = TRUE, ...)

## S3 method for class 'formula'
as_reaction(x, log_k = NA_real_, validate = TRUE,
  ...)

## S3 method for class 'character'
as_reaction(x, log_k = NA_real_, validate = TRUE,
  ...)

as_reaction_list(x, ...)

as.reaction_list(x, ...)

## S3 method for class 'reaction_list'
as_reaction_list(x, ...)

## S3 method for class 'list'
as_reaction_list(x, validate = TRUE, ...)

## S3 method for class 'reaction'
as_reaction_list(x, validate = TRUE, ...)

## S3 method for class 'character'
as_reaction_list(x, validate = TRUE, ...)

Arguments

lhs	The lefthand side
rhs	The righthand side
counts_lhs	The counts for molecules on the lefthand side
counts_rhs	The counts for molecules on the righthand side
log_k	The base 10 logarithm of the reaction quotient
validate	Flag to validate molecules in the reaction
...	Passed to/from methods
x	An object to convert to a reaction object
coefficient	coefficient corresponding to as_reaction input

Value

A reaction object

Examples

reaction(c("H2O", "H+"), "H3O+", log_k = 14)

paleolimbot/chemr documentation built on Sept. 11, 2021, 2:02 p.m.