Man pages for palfalvi/badirater
Helper functions to run and process BadiRate analysis in whole-genome scale
| bd_branch_numbers | Give branch numbering for BadiRate |
| bd_collect | Collect results files from BadiRate runs. |
| bd_decode_tree_ids | Decoding branch numbers to species compositions |
| bd_extract_gain | Extract and parse gain/loss information by the selected best... |
| bd_model_select | Model selection from likelihood test and wAIC measurment |
| prepare_badirate | Create BadiRate setup table and corresponding scripts for PBS... |
| qstat | Wrapper to qstat command |
| qsub | Wrapper to qsub command |
| sbatch | Wrapper to sbatch command |
| split_orthogroups | Splitting and filtering orthogroups to individual files |
| squeue | Wrapper to queue command |
