get_series_info: Get image series information
In pamelarussell/TCIApathfinder: Client for the Cancer Imaging Archive REST API

Description Usage Arguments Value See Also Examples

Get image series information

get_series_info(
  collection = NULL,
  patient_id = NULL,
  study_instance_uid = NULL,
  series_instance_uid = NULL,
  modality = NULL,
  body_part_examined = NULL,
  manufacturer_model_name = NULL,
  manufacturer = NULL
)

`collection`	TCIA collection name. To get a list of available collection names, call `get_collection_names`. If `collection` is `NULL`, information for all relevant collections will be returned.
`patient_id`	Patient ID. To get a list of available patient IDs, call `get_patient_info`. If `patient_id` is `NULL`, information for all relevant patients will be returned.
`study_instance_uid`	Study instance UID. If `study_instance_uid` is `NULL`, information for all relevant study instance UIDs will be returned. To get available study instance UIDs, call `get_studies_in_collection`, `get_patient_studies`, or `get_new_studies_in_collection`.
`series_instance_uid`	Series instance UID. To get a list of available series instance UIDs, call this function leaving out parameter `series_instance_uid`. If `series_instance_uid` is `NULL`, information for all relevant series will be returned.
`modality`	Modality name. To get a list of available modality names, call `get_modality_names` or see DICOM Modality Abbreviations. If `modality` is `NULL`, information for all relevant modalities will be returned.
`body_part_examined`	Body part name. To get a list of available body part names, call `get_body_part_names`. If `body_part_examined` is `NULL`, information for all relevant body parts will be returned. IMPORTANT: a bug in this query key has been observed in the TCIA API. If queries using this key return zero results, try removing this parameter.
`manufacturer_model_name`	Manufacturer model name. To get a list of available model names, call this function leaving out parameter `manufacturer_model_name`. If `manufacturer_model_name` is `NULL`, information for all relevant model names will be returned.
`manufacturer`	Manufacturer name. To get a list of available manufacturer names, call `get_manufacturer_names`. If `manufacturer` is `NULL`, information for all relevant manufacturers will be returned.

List containing elements:

series: Data frame with columns representing the contents of a Series object as described in TCIA API Return Values
content: parsed API response content
response: API response

get_collection_names, get_patient_info, get_studies_in_collection, get_patient_studies, get_new_studies_in_collection, get_modality_names, get_body_part_names, get_manufacturer_names, TCIA REST API Usage Guide, TCIA API object definitions

## Not run: 
get_series_info()
get_series_info(collection = "TCGA-BRCA")
get_series_info(patient_id = "TCGA-OL-A6VO")
get_series_info(modality = "MR", manufacturer = "GE MEDICAL SYSTEMS")

## End(Not run)