get_studies_in_collection: Get studies in a collection and optionally for a specific...

In pamelarussell/TCIApathfinder: Client for the Cancer Imaging Archive REST API

Description

Get studies in a collection and optionally for a specific patient

Usage

get_studies_in_collection(collection, patient_id = NULL)

Arguments

collection	TCIA collection name. To get a list of available collection names, call get_collection_names.
patient_id	Patient ID. To get a list of available patient IDs, call get_patient_info. If patient_id is NULL, studies for all patients in the collection will be returned.

Value

List containing elements:

• studies: Data frame of collection, patient ID, and study instance UID

• content: parsed API response content

• response: API response

See Also

get_collection_names, get_patient_info, TCIA REST API Usage Guide, TCIA API object definitions

Examples

## Not run: 
get_studies_in_collection("TCGA-BRCA")
get_studies_in_collection("TCGA-BRCA", "TCGA-OL-A66O")

## End(Not run)

pamelarussell/TCIApathfinder documentation built on Feb. 11, 2021, 7:02 a.m.