save_extracted_image_series: Save a series of DICOM image files to a directory

In pamelarussell/TCIApathfinder: Client for the Cancer Imaging Archive REST API

Description

Save a series of DICOM image files to a directory

Usage

save_extracted_image_series(
  series_instance_uid,
  out_dir = NULL,
  verbose = TRUE
)

extract_image_series(zip_file, out_dir = NULL)

Arguments

series_instance_uid	Series instance UID. To get a list of available series instance UIDs, call get_series_info. Note: if series_instance_uid is invalid, the API may still successfully return an empty zip file.
out_dir	Directory to write zip file to
verbose	print diagnostic messages
zip_file	downloaded zip file, usually output of save_image_series

Value

List containing elements:

• files: The output zip file that was written

• dirs: Directories of the files

• out_file: The output zip file that was written

• response: API response

Examples

## Not run: 
save_extracted_image_series(
     series_instance_uid = "1.3.6.1.4.1.14519.5.2.1.5382.4002.806935685832642465081499816867")

## End(Not run)

pamelarussell/TCIApathfinder documentation built on Feb. 11, 2021, 7:02 a.m.