Files in parksandwildlife/wastdr

WA Sea Turtle Database 'WAStD' API Wrapper

.Rbuildignore

.github/.gitignore

.github/workflows/main.bak

.github/workflows/pkgdown.yaml

.github/workflows/tic.yml

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/absolute_angle.R R/add_dates.R R/add_nest_labels.R R/build_auth.R R/check_wastd_api.R R/data.R R/datetime_as_isoweek.R R/datetime_as_season.R R/datetime_as_seasonweek.R R/datetime_as_turtle_date.R R/download_minimal_wastd_turtledata.R R/download_odkc_turtledata_2019.R R/download_odkc_turtledata_2020.R R/download_w2_data.R R/download_wastd_sites.R R/download_wastd_turtledata.R R/download_wastd_users.R R/export_wastd_turtledata.R R/extract_possibly.R R/fdate_as_tdate.R R/filter_odkc_turtledata.R R/filter_wastd_turtledata.R R/filters.R R/get_more.R R/gj_linestring_to_st_linestring.R R/handle_http_status.R R/httpdate_as_gmt08.R R/httpdate_as_gmt08_turtle_date.R R/httpdate_as_season.R R/humanize.R R/join_tsc_sites.R R/leaflet_basemap.R R/map_chr_hack.R R/map_dist.R R/map_dist_odkc.R R/map_fanangles.R R/map_mwi.R R/map_mwi_odkc.R R/map_nests.R R/map_sitevisit.R R/map_tracks.R R/map_tracks_odkc.R R/map_tt_odkc.R R/map_wamtram.R R/map_wastd.R R/map_wastd_wamtram_sites.R R/mean_bearing.R R/mis_bearing.R R/parse_animal_encounters.R R/parse_area.R R/parse_area_sf.R R/parse_encounterobservations.R R/parse_surveys.R R/parse_turtle_nest_encounters.R R/summarise_dist.R R/summarise_fanangles.R R/summarise_mwi.R R/summarise_surveys.R R/summarise_tracks.R R/summarise_tracks_odkc.R R/summarise_wastd_data.R R/tdate_as_fdate.R R/tracks_as_geojson.R R/tracks_ts.R R/tun.R R/urlize.R R/utils-lifecycle.R R/utils-tidy-eval.R R/verify_odkc_turtledata.R R/verify_wamtram_data.R R/verify_wastd_data.R R/w2_online.R R/wastd_GET.R R/wastd_POST.R R/wastd_bulk_post.R R/wastd_chunk_post.R R/wastd_create_update_skip.R R/wastd_parse.R R/wastd_post_one.R R/wastdr.R R/wastdr_msg.R R/wastdr_settings.R README.Rmd README.md

_pkgdown.yml

codecov.yml

data-raw/.gitignore

data-raw/generate_data.R

data/odkc_data.rda

data/tsc_data.rda

data/wastd_ae.rda

data/wastd_ae_raw.rda

data/wastd_area_raw.rda

data/wastd_data.rda

data/wastd_surveys_raw.rda

data/wastd_tne.rda

data/wastd_tne_raw.rda

inst/.gitignore

inst/2022-08-16_odk_older/MarineWildlifeIncident.odkbuild

inst/2022-08-16_odk_older/MarineWildlifeIncident.xml

inst/2022-08-16_odk_older/PredatororDisturbance.odkbuild

inst/2022-08-16_odk_older/PredatororDisturbance.xml

inst/2022-08-16_odk_older/SiteVisitEnd.odkbuild

inst/2022-08-16_odk_older/SiteVisitEnd.xml

inst/2022-08-16_odk_older/SiteVisitStart.odkbuild

inst/2022-08-16_odk_older/SiteVisitStart.xml

inst/2022-08-16_odk_older/Soundcheck.odkbuild

inst/2022-08-16_odk_older/Soundcheck.xml

inst/2022-08-16_odk_older/TurtellyUnexpectedTomfoolery.xml

inst/2022-08-16_odk_older/TurtleSighting.odkbuild

inst/2022-08-16_odk_older/TurtleSighting.xml

inst/2022-08-16_odk_older/TurtleTagging30.odkbuild

inst/2022-08-16_odk_older/TurtleTagging30.xml

inst/2022-08-16_odk_older/TurtleTrackTally.odkbuild

inst/2022-08-16_odk_older/TurtleTrackTally.xml

inst/2022-08-16_odk_older/TurtleTrackorNest.odkbuild

inst/2022-08-16_odk_older/TurtleTrackorNest.xml

inst/2022-08-17_odk_local/MarineWildlifeIncident.odkbuild

inst/2022-08-17_odk_local/PredatorOrDisturbance.odkbuild

inst/2022-08-17_odk_local/SiteVisitEnd.odkbuild

inst/2022-08-17_odk_local/Soundcheck.odkbuild

inst/2022-08-17_odk_local/TurtleSighting.odkbuild

inst/2022-08-17_odk_local/TurtleTagging30.odkbuild

inst/2022-08-17_odk_local/TurtleTrackOrNest.odkbuild

inst/2022-08-17_odk_local/TurtleTrackTally.odkbuild

inst/2022-08-17_odk_prod/Soundcheck.odkbuild

inst/2022-08-17_odk_prod/TurtleSighting.odkbuild

inst/2022-08-17_odk_prod/TurtleTagging30.odkbuild

inst/2022-08-17_odk_prod/TurtleTrackOrNest.odkbuild

inst/2022-08-17_odk_prod/TurtleTrackTally.odkbuild

inst/WORDLIST

inst/damage_types.ods

man-roxygen/param-auth.R man-roxygen/param-cluster.R man-roxygen/param-export.R man-roxygen/param-fmt.R man-roxygen/param-local_dir.R man-roxygen/param-placename.R man-roxygen/param-prefix.R man-roxygen/param-season.R man-roxygen/param-serializer.R man-roxygen/param-site_id.R man-roxygen/param-surveys.R man-roxygen/param-tokenauth.R man-roxygen/param-tracks.R man-roxygen/param-tz.R man-roxygen/param-usermapping.R man-roxygen/param-value-odkc-tracks.R man-roxygen/param-verbose.R man-roxygen/param-wastd-data.R man-roxygen/param-wastd-dist.R man-roxygen/param-wastd_url.R man-roxygen/return-wastd-api-response.R man/absolute_angle.Rd man/add_dates.Rd man/add_hatching_emergence_success_odkc.Rd man/add_nest_labels.Rd man/add_nest_labels_odkc.Rd man/build_auth.Rd man/datetime_as_isoweek.Rd man/datetime_as_season.Rd man/datetime_as_seasonweek.Rd man/datetime_as_turtle_date.Rd man/disturbance_by_season.Rd man/download_minimal_wastd_turtledata.Rd man/download_odkc_turtledata_2020.Rd man/download_w2_data.Rd man/download_wastd_sites.Rd man/download_wastd_turtledata.Rd man/download_wastd_users.Rd man/duplicate_surveys.Rd man/exclude_training_species.Rd man/exclude_training_species_odkc.Rd man/exclude_training_surveys.Rd man/export_wastd_turtledata.Rd man/extract_possibly.Rd man/fdate_as_tdate.Rd

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man/filter_alive.Rd man/filter_dead.Rd man/filter_disturbance.Rd man/filter_missing_site.Rd man/filter_missing_survey.Rd man/filter_odkc_turtledata.Rd man/filter_predation.Rd man/filter_surveys_missing_end.Rd man/filter_surveys_requiring_qa.Rd man/filter_wastd_season.Rd man/filter_wastd_turtledata.Rd man/filter_wastd_turtledata_area.Rd man/filter_wastd_turtledata_seasons.Rd man/general_disturbance_by_season_odkc.Rd man/get_more.Rd man/ggplot_disturbance_by_season.Rd man/ggplot_emergence_success.Rd man/ggplot_hatching_success.Rd man/ggplot_hatchling_misorientation.Rd man/ggplot_nesting_success_per_area_season_species.Rd man/ggplot_nesting_success_per_area_season_species_pct.Rd man/ggplot_sighting_status_per_area_season_species.Rd man/ggplot_total_emergences_per_area_season_species.Rd man/ggplot_track_success_by_date.Rd man/ggplot_track_successrate_by_date.Rd man/gj_linestring_to_st_linestring.Rd man/handle_http_status.Rd man/hatching_emergence_success.Rd man/hatching_emergence_success_area.Rd man/hatching_emergence_success_odkc.Rd man/hatching_emergence_success_site.Rd man/httpdate_as_gmt08.Rd man/httpdate_as_gmt08_turtle_date.Rd man/httpdate_as_season.Rd man/humanize.Rd man/join_tsc_sites.Rd man/leaflet_basemap.Rd man/lifecycle_shim.Rd man/list_survey_count.Rd man/list_survey_effort.Rd man/map_chr_hack.Rd man/map_dist.Rd man/map_dist_odkc.Rd man/map_fanangles.Rd man/map_mwi.Rd man/map_mwi_odkc.Rd man/map_nests.Rd man/map_sv_odkc.Rd man/map_tracks.Rd man/map_tracks_odkc.Rd man/map_tt_odkc.Rd man/map_wamtram.Rd man/map_wastd.Rd man/map_wastd_wamtram_sites.Rd man/mean_bearing.Rd man/mis_bearing.Rd man/nest_disturbance_by_season_odkc.Rd man/nesting_success_per_area_day_species.Rd man/nesting_success_per_area_season_species.Rd man/nesting_type_by_area_season_age_species.Rd man/nesting_type_by_area_season_age_species_odkc.Rd man/nesting_type_by_area_season_species.Rd man/nesting_type_by_area_season_species_odkc.Rd man/nesting_type_by_season_age_species.Rd man/nesting_type_by_season_age_species_odkc.Rd man/nesting_type_by_season_calendarday_age_species.Rd man/nesting_type_by_season_calendarday_age_species_odkc.Rd man/nesting_type_by_season_calendarday_species.Rd man/nesting_type_by_season_calendarday_species_odkc.Rd man/nesting_type_by_season_day_species.Rd man/nesting_type_by_season_day_species_odkc.Rd man/nesting_type_by_season_species.Rd man/nesting_type_by_season_species_odkc.Rd man/nesting_type_by_season_week_age_species.Rd man/nesting_type_by_season_week_age_species_odkc.Rd man/nesting_type_by_season_week_site_species.Rd man/nesting_type_by_season_week_site_species_odkc.Rd man/nesting_type_by_season_week_species.Rd man/nesting_type_by_season_week_species_odkc.Rd man/nesting_type_by_site_season_age_species.Rd man/nesting_type_by_site_season_age_species_odkc.Rd man/nesting_type_by_site_season_species.Rd man/nesting_type_by_site_season_species_odkc.Rd man/odkc_data.Rd man/odkc_works.Rd man/parse_animal_encounters.Rd man/parse_area.Rd man/parse_area_sf.Rd man/parse_encounterobservations.Rd man/parse_surveys.Rd man/parse_turtle_nest_encounters.Rd man/pipe.Rd man/plot_survey_count.Rd man/plot_survey_effort.Rd man/print.odkc_turtledata.Rd man/print.wamtram_data.Rd man/print.wastd_api_response.Rd man/print.wastd_data.Rd man/read_table.Rd man/sentencecase.Rd man/sf_as_tbl.Rd man/sfdeps.Rd man/sighting_status_per_area_season_species.Rd man/sighting_status_per_site_season_species.Rd man/summarise_hatching_and_emergence_success.Rd man/summarise_wastd_data_per_day_site.Rd man/survey_count.Rd man/survey_count_heatmap.Rd man/survey_ground_covered.Rd man/survey_hours_heatmap.Rd man/survey_hours_per_person.Rd man/survey_hours_per_site_name_and_date.Rd man/survey_season_site_stats.Rd man/survey_season_stats.Rd man/survey_show_detail.Rd man/surveys_per_site_name_and_date.Rd man/tdate_as_fdate.Rd man/tidyeval.Rd man/total_emergences_per_area_season_species.Rd man/total_emergences_per_site_season_species.Rd man/track_success.Rd man/track_success_by_species.Rd man/tracks_as_geojson.Rd man/tracks_ts.Rd man/tsc_data.Rd man/tun.Rd man/urlize.Rd man/verify_odkc_turtledata.Rd man/verify_wamtram_data.Rd man/verify_wastd_data.Rd man/w2_online.Rd man/wastd_GET.Rd man/wastd_POST.Rd man/wastd_ae.Rd man/wastd_ae_raw.Rd man/wastd_area_raw.Rd man/wastd_bulk_post.Rd man/wastd_chunk_post.Rd man/wastd_create_update_skip.Rd man/wastd_data.Rd man/wastd_parse.Rd man/wastd_post_one.Rd man/wastd_surveys_raw.Rd man/wastd_tne.Rd man/wastd_tne_raw.Rd man/wastd_works.Rd man/wastdr-package.Rd man/wastdr_msg_abort.Rd man/wastdr_msg_info.Rd man/wastdr_msg_noop.Rd man/wastdr_msg_success.Rd man/wastdr_msg_warn.Rd man/wastdr_settings.Rd man/wastdr_setup.Rd

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pkgdown/favicon/favicon.ico

tests/spelling.R tests/testthat.R

tests/testthat/.gitignore

tests/testthat/test-absolute_angle.R tests/testthat/test-build_auth.R tests/testthat/test-check_wastd_api.R tests/testthat/test-chr2int.R tests/testthat/test-data.R tests/testthat/test-datetime_as_isoweek.R tests/testthat/test-datetime_as_season.R tests/testthat/test-datetime_as_seasonweek.R tests/testthat/test-datetime_as_turtle_date.R tests/testthat/test-download_minimal_wastd_turtledata.R tests/testthat/test-download_odkc_turtledata_2019.R tests/testthat/test-download_odkc_turtledata_2020.R tests/testthat/test-download_w2_data.R tests/testthat/test-download_wastd_sites.R tests/testthat/test-download_wastd_turtledata.R tests/testthat/test-download_wastd_users.R tests/testthat/test-export_wastd_turtledata.R tests/testthat/test-extract_possibly.R tests/testthat/test-fdate_as_tdate.R tests/testthat/test-filter_odkc_turtledata.R tests/testthat/test-filter_wastd_turtledata.R tests/testthat/test-filters.R tests/testthat/test-get_more.R tests/testthat/test-get_num_field.R tests/testthat/test-ggplot_hatchling_misorientation.R tests/testthat/test-gj_linestring_to_st_linestring.R tests/testthat/test-handle_http_status.R tests/testthat/test-httpdate_as_gmt08.R tests/testthat/test-httpdate_as_gmt08_turtle_date.R tests/testthat/test-httpdate_as_season.R tests/testthat/test-humanize.R tests/testthat/test-join_tsc_sites.R tests/testthat/test-leaflet_basemap.R tests/testthat/test-map_dist.R tests/testthat/test-map_dist_odkc.R tests/testthat/test-map_fanangles.R tests/testthat/test-map_mwi.R tests/testthat/test-map_mwi_odkc.R tests/testthat/test-map_nests.R tests/testthat/test-map_sv_odkc.R tests/testthat/test-map_tracks.R tests/testthat/test-map_tracks_odkc.R tests/testthat/test-map_wamtram.R tests/testthat/test-map_wastd.R tests/testthat/test-mean_bearing.R tests/testthat/test-mis_bearing.R tests/testthat/test-nesting_success_per_area_day_species.R tests/testthat/test-nesting_success_per_area_season_species.R tests/testthat/test-parse_area.R tests/testthat/test-parse_area_sf.R tests/testthat/test-parse_community_conservationlisting.R tests/testthat/test-parse_disturbance_observations.R tests/testthat/test-parse_encounterobservations.R tests/testthat/test-parse_surveys.R tests/testthat/test-parse_taxon_conservationlisting.R tests/testthat/test-parse_turtle_nest_encounters.R tests/testthat/test-settings.R tests/testthat/test-sighting_status_per_area_season_species.R tests/testthat/test-sighting_status_per_site_season_species.R tests/testthat/test-summarise_dist.R tests/testthat/test-summarise_mwi.R tests/testthat/test-summarise_surveys.R tests/testthat/test-summarise_tracks.R tests/testthat/test-summarise_tracks_odkc.R tests/testthat/test-summarise_wastd_data_per_day_site.R tests/testthat/test-tdate_as_fdate.R tests/testthat/test-tracks_as_geojson.R tests/testthat/test-tracks_ts.R tests/testthat/test-urlize.R tests/testthat/test-verify_odkc_turtledata.R tests/testthat/test-verify_wamtram_data.R tests/testthat/test-verify_wastd_data.R tests/testthat/test-w2_online.R tests/testthat/test-wastd_GET.R tests/testthat/test-wastd_POST.R tests/testthat/test-wastd_bulk_post.R tests/testthat/test-wastd_post_one.R tests/testthat/test-wastdr_msg.R tic.R

vignettes/.gitignore

vignettes/access.Rmd vignettes/analysis.Rmd vignettes/setup.Rmd vignettes/tsc.Rmd vignettes/wamtram.Rmd

wastdr.Rproj

parksandwildlife/wastdr documentation built on Nov. 17, 2022, 4:52 p.m.