tx2gene: tx2gene wrapper
In patterja/smmartprediction: SMMART Drug Prediction
Description
Usage
Arguments
Value
Description
Convert kallisto output to gene level
Usage
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tx2gene(
path_to_target = "target_id.txt",
path_to_kallisto_output = "/Volumes/exahead1/lustre1/HeiserLab/patterja/tatlow_SMMART/output"
)
Arguments
path_to_target
(string): path to the target_id.txt. file that converts ENSEMBL ids to HGVS. Filtering by trusight genes
path_to_kallisto_output
(string): path to output of kallisto
Value
genetxi
patterja/smmartprediction documentation built on Oct. 10, 2020, 3:35 p.m.
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Description Usage Arguments Value
Description
Convert kallisto output to gene level
Usage
1 2 3 4 5 | tx2gene(
path_to_target = "target_id.txt",
path_to_kallisto_output = "/Volumes/exahead1/lustre1/HeiserLab/patterja/tatlow_SMMART/output"
)
|
Arguments
path_to_target |
(string): path to the target_id.txt. file that converts ENSEMBL ids to HGVS. Filtering by trusight genes |
path_to_kallisto_output |
(string): path to output of kallisto |
Value
genetxi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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