Figure: Plot ROC or PR curve

In paubellot/DREAM_Evaluation: Evaluation of GRN inference against Golden Standard with DREAM framework.

Description

Plot ROC or PR curve

Usage

figure(ev, fig = "pr", two = FALSE, ...)

Arguments

ev	list containg the evaluation' metrics. Output of DREAM_Evaluation function
fig	charater of the kind of plot ("pr" or "roc")
two	logical indicating if the random extension should be marked or not
...	additional parameter to the plot

Examples

net <- matrix(rnorm(100),10,10)
GS <- matrix(rnorm(100),10,10)
GS[which(GS>0.5)]<-1
GS[GS!=1] <- 0
diag(GS) <- 0
net <- change_network_format(net)
GS <- change_network_format(GS)
Ev <- DREAM_Evaluation(GS,net)
Figure(Ev)

paubellot/DREAM_Evaluation documentation built on May 24, 2019, 8:22 p.m.