Files in pboesu/debinfer
Bayesian Inference for Differential Equations

.Rbuildignore
.gitattributes
.gitignore
.travis.yml
DEBinfer.Rproj
DESCRIPTION
NAMESPACE
NEWS.md R/data_doc.R R/de_mcmc_rev.R R/de_solver.R R/debinfer_utils.R R/mcmc_plotting.R R/setup_mcmc.R README.md
codecov.yml
cran-comments.md
data-raw/coldinwarm.csv
data-raw/create_chytrid_data.R data-raw/create_logistic_data.R
data/chytrid.rda
data/logistic.rda
docs/chytrid.html
docs/css/bootstrap-responsive.css
docs/css/bootstrap-responsive.min.css
docs/css/bootstrap.css
docs/css/bootstrap.min.css
docs/css/highlight.css
docs/css/staticdocs.css
docs/de_mcmc.html
docs/debinfer_par.html
docs/deinits.html
docs/depars.html
docs/img/glyphicons-halflings-white.png
docs/img/glyphicons-halflings.png
docs/index.html
docs/is.debinfer_result.html
docs/js/bootstrap.js
docs/js/bootstrap.min.js
docs/log_post_params.html
docs/log_prior_params.html
docs/logd_prior.html
docs/logistic.html
docs/pairs.debinfer_result.html
docs/plot.debinfer_result.html
docs/plot.post_sim_list.html
docs/post_prior_densplot.html
docs/post_sim.html
docs/prior_draw_rev.html
docs/propose_joint_rev.html
docs/propose_single_rev.html
docs/reference.html
docs/reshape_post_sim.html
docs/setup_debinfer.html
docs/solve_de.html
docs/summary.debinfer_result.html
docs/update_sample_rev.html
docs/vignettes/chytrid_dede_example.pdf docs/vignettes/deBInfer_compiled_code.pdf docs/vignettes/logistic_ode_example.pdf
inst/CITATION
inst/doc/chytrid_dede_example.R inst/doc/chytrid_dede_example.Rmd inst/doc/chytrid_dede_example.pdf inst/doc/deBInfer_compiled_code.R inst/doc/deBInfer_compiled_code.pdf
inst/doc/deBInfer_compiled_code.pdf.asis
inst/doc/logistic_ode_example.R inst/doc/logistic_ode_example.Rmd inst/doc/logistic_ode_example.pdf man/chytrid.Rd man/de_mcmc.Rd man/debinfer_cov.Rd man/debinfer_par.Rd man/deinits.Rd man/depars.Rd man/is.debinfer_parlist.Rd man/is.debinfer_result.Rd man/log_post_params.Rd man/log_prior_params.Rd man/logd_prior.Rd man/logistic.Rd man/pairs.debinfer_result.Rd man/plot.debinfer_result.Rd man/plot.post_sim_list.Rd man/post_prior_densplot.Rd man/post_sim.Rd man/prior_draw_rev.Rd man/propose_joint_rev.Rd man/propose_single_rev.Rd man/reshape_post_sim.Rd man/setup_debinfer.Rd man/solve_de.Rd man/summary.debinfer_result.Rd man/update_sample_rev.Rd
sandbox/CSZ_benchmark_solvealways.png
sandbox/benchmarking_utils.R
sandbox/benchmarks-always-solve.RDS
sandbox/benchmarks-dont-solve-obs-dde.RDS
sandbox/benchmarks-dont-solve-obs.RDS
sandbox/chytrid_dede_example.R sandbox/conversion_notes.Rmd sandbox/dde_mcmc_rev_sandbox.R sandbox/dde_solver_sandbox.R sandbox/demo/DEB_daphnia.r sandbox/demo/deb_post_prior_daph.R sandbox/demo/run_mcmc_daphnia.R sandbox/joint-proposals-sandbox.R sandbox/legacy/de_mcmc_legacy.R sandbox/legacy/plotting_legacy.R sandbox/legacy/setup_mcmc_legacy.R sandbox/legacy/solver_utils_legacy.R sandbox/mcmc_rev_sandbox.R sandbox/moment_matching.R sandbox/ode_solver_sandbox.R sandbox/parlist_remapping.R sandbox/prior_evaluation_test.R sandbox/sampler_benchmarking.R sandbox/walb_deb_obs_model.R tests/testthat.R tests/testthat/test_debinfer_par.R tests/testthat/test_inference_logistic.R tests/testthat/test_joint_inference.R tests/testthat/test_likelihood_eval.R tests/testthat/test_samplers.R
vignettes/.build.timestamp
vignettes/chytrid_dede_example.R vignettes/chytrid_dede_example.Rmd
vignettes/chytrid_dede_example_files/figure-latex/data-1.png
vignettes/deBInfer_compiled_code.pdf.asis
vignettes/deBInfer_compiled_code.pdf.bak
vignettes/debinfer.bib
vignettes/epsilon-sensitivity.pdf vignettes/logistic_ode_example.Rmd
vignettes/methods-in-ecology-and-evolution.csl
pboesu/debinfer documentation built on Oct. 26, 2018, 11:08 a.m.