applyFilter: Apply an RPM filter to the data
In pbreheny/deepn: Dynamic Enrichment for Evaluation of Protein Networks
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Restricts downstream analysis to only those guides with a
specified abundance in terms of mapped reads per million
Usage
1
applyFilter(Data, thresh, base=TRUE)
Arguments
Data
Data (probably should make this a specific class, like "deepn")
from import or importFromDeepn.
thresh
Reads per million (RPM) threshold to apply.
base
Apply baseline filter? By default, a threshold is applied
to both baseline and selection conditions.
Details
More specifics on filter.
Value
A deepn object.
Author(s)
Patrick Breheny
See Also
Examples
1
## Not run: applyFilter(Data, 3)
pbreheny/deepn documentation built on May 11, 2020, 3:49 a.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
Restricts downstream analysis to only those guides with a specified abundance in terms of mapped reads per million
Usage
1 | applyFilter(Data, thresh, base=TRUE)
|
Arguments
Data |
Data (probably should make this a specific class, like "deepn")
from |
thresh |
Reads per million (RPM) threshold to apply. |
base |
Apply baseline filter? By default, a threshold is applied to both baseline and selection conditions. |
Details
More specifics on filter.
Value
A deepn object.
Author(s)
Patrick Breheny
See Also
Examples
1 | ## Not run: applyFilter(Data, 3)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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