plot_depths: Plot depth boxplots by year (catchdate) or histograms for a...

In pbs-assess/hakedata: Data Extraction for Pacific Hake Assessment

Description

Plot depth boxplots by year (catchdate) or histograms for a single year

Usage

plot_depths(
  d,
  plot_type = "hist",
  depth_type = "bottom",
  fishery_type = NA,
  depth_max = 1500,
  bin_width = 10,
  xlim = c(NA, NA),
  ylim = c(NA, NA),
  alpha = 0.6,
  show_legend = FALSE,
  legend_loc = "inside"
)

Arguments

d	The data frame as returned by the spatial SQL queries found in this in the variable spatial_catch_sql_file
plot_type	Type of plot, one of 'hist' or 'box'
depth_type	Type of depth to plot: 'bottom' or 'gear'.
fishery_type	One of NA, 'ft', 'ss', or 'jv'. If NA, all fisheries will be plotted against one another, if one of the others, that will be filtered before plotting
depth_max	Maximum depth. Remove records with depth greater than this. IF NA, no restrictions will be placed on the depth.
bin_width	See ggplot2::geom_histogram()
xlim	Limits for the x-axis. For c(NA, NA), plot will extend to limits of data
alpha	Transparency of fill from 0 - 1
show_legend	Logical for inclusion of legend
legend_loc	Where to place legend "inside" or "outside" the frame of the plot

Value

A ggplot2 object

pbs-assess/hakedata documentation built on Jan. 16, 2021, 9:15 p.m.