inst/epitoc2/preprocess.r
In perishky/meffonym: DNA methylation exposure and phenotypic archive
## epiTOC2
## 10.1186/s13073-020-00752-3
## download code and model from here 10.5281/zenodo.2632938
## code:
## download.file("https://zenodo.org/record/2632938/files/epiTOC2.R?download=1", destfile="epitoc2.r")
download.file("https://zenodo.org/record/2632938/files/dataETOC2.Rd?download=1", destfile="dataETOC2.Rd")
load("dataETOC2.Rd")
x <- as.data.frame(dataETOC2.l$epiTOC2)
x$cpg <- rownames(x)
write.csv(x, file="coefs.csv", row.names=F)
perishky/meffonym documentation built on April 5, 2024, 12:21 a.m.
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## epiTOC2
## 10.1186/s13073-020-00752-3
## download code and model from here 10.5281/zenodo.2632938
## code:
## download.file("https://zenodo.org/record/2632938/files/epiTOC2.R?download=1", destfile="epitoc2.r")
download.file("https://zenodo.org/record/2632938/files/dataETOC2.Rd?download=1", destfile="dataETOC2.Rd")
load("dataETOC2.Rd")
x <- as.data.frame(dataETOC2.l$epiTOC2)
x$cpg <- rownames(x)
write.csv(x, file="coefs.csv", row.names=F)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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