Files in peterawe/CMScaller
CMScaller: an R package for consensus molecular subtyping of colorectal cancer pre-clinical models
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/CMScaller.R
R/CMSgsa.R
R/cohensKappa.R
R/corCosine.R
R/data.R
R/ematAdjust.R
R/fromTo.R
R/ntp.R
R/ntpMakeTemplates.R
R/plotPC.R
R/replaceGeneId.R
R/rutils.R
R/subBoxplot.R
R/subCamera.R
R/subDEG.R
R/subHeatmap.R
R/subMA.R
R/subMDS.R
R/subPCA.R
R/subPairs.R
R/subSetNA.R
R/subVolcano.R
R/sysdata.rda
R/voomTransform.R
README.md
data/anno.orgHs.rda
data/crcTCGAsubset.rda
data/geneSets.CMS.rda
data/geneSets.CRC.rda
data/geneSets.reactome.rda
data/templates.CMS.rda
data/templates.CRIS.rda
data/templates.MSI.rda
inst/CITATION
inst/doc/CMScaller.R
inst/doc/CMScaller.Rmd
inst/doc/CMScaller.html
inst/doc/CMScaller.pdf
man/CMScaller.Rd
man/CMSgsa.Rd
man/anno.orgHs.Rd
man/cohensKappa.Rd
man/corCosine.Rd
man/crcTCGAsubset.Rd
man/ematAdjust.Rd
man/fromTo.Rd
man/geneSets.CMS.Rd
man/geneSets.CRC.Rd
man/geneSets.reactome.Rd
man/ntp.Rd
man/ntpMakeTemplates.Rd
man/replaceGeneId.Rd
man/subBoxplot.Rd
man/subCamera.Rd
man/subDEG.Rd
man/subHeatmap.Rd
man/subMA.Rd
man/subMDS.Rd
man/subPCA.Rd
man/subPairs.Rd
man/subSetNA.Rd
man/subVolcano.Rd
man/templates.CMS.Rd
man/templates.CRIS.Rd
man/templates.MSI.Rd
vignettes/CMScaller.Rmd
vignettes/CMScaller.bib
vignettes/biomed-central
