annotate_SEcollapsed: Add collapsed annotations SYMBOLSs, ENTREZIDs (;-separated)...
In peterjuv/FunGenPipe: Tools for building function genomics pipelines
Description
Usage
Arguments
Value
Description
Sets fData(eset) and annotation(eset); keeps probes w/o annotations.
Warning: SYMBOLSs and ENTREZIDs are unique and individually sorted; thus, they are not matches by their position within the collapsed strings.
Usage
1
annotate_SEcollapsed(eset, annPackage)
Arguments
eset
ExpressionSet
annPackage
Character AnnotationDbi package name, e.g. "clariomsmousetranscriptcluster.db"
Value
ExpressionSet eset with collapsed annotations in slot fData(eset) and annotations(eset) set to DB name (annPackage)
peterjuv/FunGenPipe documentation built on June 18, 2021, 3:38 a.m.
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Description Usage Arguments Value
Description
Sets fData(eset) and annotation(eset); keeps probes w/o annotations. Warning: SYMBOLSs and ENTREZIDs are unique and individually sorted; thus, they are not matches by their position within the collapsed strings.
Usage
1 | annotate_SEcollapsed(eset, annPackage)
|
Arguments
eset |
ExpressionSet |
annPackage |
Character AnnotationDbi package name, e.g. "clariomsmousetranscriptcluster.db" |
Value
ExpressionSet eset with collapsed annotations in slot fData(eset) and annotations(eset) set to DB name (annPackage)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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