run_scenario: Run Scenarios Function to run scenarios in parallel. Returns...

In peterkuriyama/hlsimulator: Simulate Hook and Line Survey

Description

Run Scenarios Function to run scenarios in parallel. Returns three things, a list of all the output from conduct_survey, cpue summarized by each value in loop_over, and summarized data for each year.

Usage

run_scenario(ctl_start, loop_over, ncores = 1, to_change, add_index = FALSE,
  par_func)

Arguments

ctl_start	Output from make_ctl function
loop_over	Vector of values to loop over
ncores	Number of cores to run in parallel, default is 1
to_change	Specify which value to modify in lapply statement. Should be the values in
add_index	Specify add index or not, for locations
par_func	Turn parallel run option on or off loop_over and be a character string

Examples

ctl1 <- make_ctl(distribute = 'patchy', mortality = 0, move_out_prob = .5,
      nfish1 = 0, nfish2 = 0, prob1 = .01, prob2 = 0, nyear = 15, scope = 1, seed = 4,
      location = one_loc, numrow = 1, numcol = 1)  
ttest <- run_scenario(ctl = ctl, loop_over = seq(100, 1500, by = 100), to_change = 'nfish1', 
  ncores = 6)

peterkuriyama/hlsimulator documentation built on May 25, 2019, 1:51 a.m.