make_ctl: Make Control
In peterkuriyama/hlsimulator: Simulate Hook and Line Survey

Define arguments for hook and line simulations Used in initialize_population

make_ctl(numrow = 10, numcol = 10, nfish1 = 10000, nfish2 = 0,
  prob1 = 0.1, prob2 = 0, distribute = "uniform", maxfish = 10,
  percent = 0.3, area = NULL, seed = 300, move_out_prob = 0.4,
  location = data.frame(vessel = c(1, 1, 2), x = c(3, 3, 8), y = c(3, 5, 8)),
  scope = 1, nhooks = 5, ndrops = 5, nangs = 3,
  process = "equal_prob", p0 = 0.4, nyear = 10, browser = FALSE,
  cpue_method = "average", mortality, movement_function = move_fish_none,
  max_prob = 0.1, min_prob = 0.1, comp_coeff = NA, rec_rate = NA,
  rec_years = NA, hs_loc = NA, hs_scope = NA, delta = NA, shapes = NA,
  niters = 1, par_func = "change_two", depletion_type = "none",
  prop_moving = 0)

`numrow`	Number of rows in matrix
`numcol`	Number of columns in matrix
`nfish1`	Number of fish1 to allocate among matrix
`nfish2`	Number of fish2 to allocate among matrix
`prob1`	Probability of catching species 1
`prob2`	Probability of catching species 2
`distribute`	Specify fish distribution to be 'uniform', 'patchy', or 'area' specific
`maxfish`	Maximum number of fish that can be sampled at a time; default is 10
`percent`	percentage of area to sample. Only necessary if distribute == 'patchy'; default is 0.3
`area`	Specify area to distribute fish, options are 'upperleft', 'upperright', 'lowerleft', 'lowerright', 'upperhalf', 'lowerhalf', 'righthalf', 'lefthalf' Only necessary if distribute == 'area'
`seed`	Set seed if distribute == random, defaults to 300
`move_out_prob`	Probability of moving out of fishing area
`location`	Data frame of locations with column for vessel, rows, and columns of fish are to fish in.
`scope`	the scope of fishing movement, default to 1 so fish in surrounding 1 cells can move in; default is 1
`nhooks`	number of hooks at the smallest sampling size; default is 5
`ndrops`	number of drops, default is 5 following hook and line protocol; default is 5
`nangs`	number of anglers, Default is 3
`process`	specify process by which fish are sampled, options are 'multinomial', 'hypergeometric', and 'equal_prob'. 'equal_prob' is based on CIE comments from 2012.
`p0`	Probability that fish detects gear, used in the hook_prob function; default is 0.4
`nyear`	Number of years in survey; default is 10
`browser`	Switch to turn on browser for debugging
`cpue_method`	Method of aggregating cpue. For use in calc_cpue function. Currently
`mortality`	Natural mortality values, can be input as single value or matrix. Percentage mortality each year if single value options are 'average', '75hooks' to aggregate by hooks, and 'weighted_average' is in development.
`movement_function`	Specify the movement function, this occurs in year 2 of the survey, defaults to no movement
`max_prob`	Maximum movement probability for movement functions; defaults to 0.1
`min_prob`	Minimum movement probability for movement functions; defaults to 0.1
`comp_coeff`	Competition coefficient, how likely to catch species 1? Defaults to NA
`rec_rate`	Recruitment rate
`rec_years`	Years of recruitment
`hs_loc`	Locations of hotspots
`hs_scope`	Scope of hotspot range. Amount of diffusion of fish
`delta`	Difference between center of hotspot and surrounding cells
`shapes`	Shape Parameters for beta distribution in initialize_population
`niters`	Number of iterations to run for each scenario
`par_func`	parameter function to parallelize
`depletion_type`	Specify the type of depletion, increasing, decreasing or the default none
`prop_moving`	Specify proportion of fish moving in or out of fishing locations