|confects_plot||Top confident effect sizes plot|
|confects_plot_me||Mean-expression vs effect size plot|
|edger_confects||Confident effect sizes based on the edgeR Quasi-Likelihood...|
|edger_group_confects||Group confects (differential 5' or 3' end usage, etc)|
|effect_contrast||Simple linear contrast effect.|
|effect_link_log2||Adapt an effect size object to work with coefficients...|
|effect_shift||Shift of mass effect|
|group_effect_shift||Group effect for shifts in 5' or 3' end usage|
|limma_confects||Confident log2 fold changes using limma's treat function,...|
|limma_nonlinear_confects||Confident non-linear effect sizes using limma|
|nest_confects||General purpose function to find sets of discoveries for a...|
|rank_rank_plot||A plot to compare two rankings|
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