Top Results by Confident Effect Size

confects_plot | Top confident effect sizes plot |

confects_plot_me | Mean-expression vs effect size plot |

edger_confects | Confident effect sizes based on the edgeR Quasi-Likelihood... |

edger_group_confects | Group confects (differential exon usage, etc) |

effect_contrast | Simple linear contrast effect. |

effect_contrast_ratio | Ratio of contrasts effect. |

effect_gamma | Goodman and Kruskall's gamma, Yule's Q |

effect_link_log2 | Adapt an effect size object to work with coefficients... |

effect_sd | Standard-deviation of a set of coefficients as effect size |

effect_shift | Shift of mass effect |

group_effect_rssm | Group effect for differential splicing |

group_effect_shift | Group effect for shifts in 5' or 3' end usage |

limma_confects | Confident log2 fold changes using limma's treat function,... |

limma_nonlinear_confects | Confident non-linear effect sizes using limma |

nest_confects | General purpose function to find sets of discoveries for a... |

rank_rank_plot | A plot to compare two rankings |

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