confects_plot_me: Mean-expression vs effect size plot

Description Usage Arguments Value

View source: R/topconfects.R

Description

Like plotMD in limma, plots effect size against mean expression level. However shows "confect" on the y axis rather than "effect" ("effect" is shown underneath in grey). This may be useful for assessing whether effects are only being detected only in highly expressed genes.

Usage

1
confects_plot_me(confects)

Arguments

confects

A "Topconfects" class object, as returned from limma_confects, edger_confects, etc.

Value

A ggplot2 object. Working non-interactively, you must print() this for it to be displayed.


pfh/topconfects documentation built on Nov. 19, 2018, 4:35 a.m.