Man pages for pginart/SNPFISHAnalysis
Creates basic analysis for Raj Lab SNP FISH workflow
| AnalyzeSNPDirectory | Does a rough, first pass SNP FISH analysis for a given... |
| ExtractFilesFromYamlGroup | Loads Yaml file and SNPTables from a YamlGroup |
| GetAllYamlGroupsinDir | Searches the given directory for all readMe.yaml files |
| ggname | Make catagory names friendly to ggplot2 |
| MakeAlleleScatterPlot | Creates scatter plot between SNPA vs SNPB counts |
| MakeGuideTablePlots | Makes a standard set of graphs for guide table |
| MakeOverallImbalanceBar | Creates bar graph comparing ratio of SNP A to SNP B in cell... |
| MakeStackedCellCountPlot | Creates standard bar plot of stacked cell counts |
| MakeTotalCellCountPie | Creates standard pie chart for cell population average |
| ReorderSNPLevels | Reorders the label's levels in table such that undetected... |
