API for phenoscape/scate-shortcourse
Short Course on Phylogenetic Comparative Analysis of Integrated Anatomical Traits

Global functions
Mk_Rev	Man page Source code
RAC_query	Man page Source code
amalgamate_deps	Man page Source code
amalgamated_fits_corHMM	Man page Source code
amalgamated_simmaps_phytools	Man page Source code
comb2matrices	Man page Source code
combNmatrices	Man page Source code
combine_subgraph	Source code
discr_Simmap	Man page Source code
discr_Simmap_all	Man page Source code
dropDependentTraits	Man page Source code
empty.df	Source code
filter_coverage	Man page Source code
get.dependencies	Source code
get_dep_state	Source code
get_descendants_chars	Man page Source code
get_graph_matrix	Man page Source code
get_onto_id	Man page Source code
get_parent_states	Source code
init_binary_matrix	Man page Source code
init_char_matrix	Man page Source code
list2edges	Man page Source code
logical_mult	Source code Source code
makeTraitTree	Man page
make_tree_eq	Man page Source code
ontologyHeatMap	Man page Source code
paramo	Man page Source code
paramo.list	Man page Source code
prepareMapsRayDISC	Man page Source code
prepareMapsRev	Man page Source code
print_coverage	Man page Source code
ratemat1	Man page Source code
read_Simmap_Rev	Man page Source code
recode_td	Man page Source code
recode_traits	Man page Source code
remove.indirect	Source code
remove_indirect	Man page Source code
stack2	Source code
stack_stm	Source code
strip_IRI	Man page Source code
table2list	Man page Source code
writeRevOntologyModels	Man page Source code

phenoscape/scate-shortcourse documentation built on Feb. 5, 2023, 12:59 a.m.

Note that we can't provide technical support on individual packages. You should contact the package authors for that.