amalgamated_fits_corHMM: A wrapper for corHMM that fits Structured Hidden State Models
In phenoscape/scate-shortcourse: Short Course on Phylogenetic Comparative Analysis of Integrated Anatomical Traits
View source: R/auto_functions.R
amalgamated_fits_corHMM R Documentation
A wrapper for corHMM that fits Structured Hidden State Models
Description
A wrapper for corHMM that fits Structured Hidden State Models
Usage
amalgamated_fits_corHMM(td, amalgamations, ...)
Arguments
td
A treeplyr treedata object
amalgamations
A list produced by 'amalgamate_deps'
...
Additional arguments passed to 'corHMM::rayDISC'
Details
This function fits the models contained in 'amalgamations$M'
to each of the characters in 'td' using the function 'corHMM::rayDISC'.
Value
A list of fits for each character in the dataset
phenoscape/scate-shortcourse documentation built on Feb. 5, 2023, 12:59 a.m.
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View source: R/auto_functions.R
| amalgamated_fits_corHMM | R Documentation |
A wrapper for corHMM that fits Structured Hidden State Models
Description
A wrapper for corHMM that fits Structured Hidden State Models
Usage
amalgamated_fits_corHMM(td, amalgamations, ...)
Arguments
td |
A treeplyr treedata object |
amalgamations |
A list produced by 'amalgamate_deps' |
... |
Additional arguments passed to 'corHMM::rayDISC' |
Details
This function fits the models contained in 'amalgamations$M' to each of the characters in 'td' using the function 'corHMM::rayDISC'.
Value
A list of fits for each character in the dataset
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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