create.timepoint.parser: Generate a closure function to parse timepoint labels from...

In phraber/lassie: Tools to select sites and sequences that represent variation in a longitudinally sampled protein alignment

Description

Generate a closure function to parse timepoint labels from sequence names.

Usage

create.timepoint.parser(field.sep, field.num)

Arguments

field.sep	Character used to separate fields in sequence names.
field.num	Field in sequence names that contains timepoint labels.

Value

Validated function to return the specific, delimited field from each sequence name.

Examples

tp <- create.timepoint.parser(field.sep=".", field.num=1)
tp <- create.timepoint.parser(field.sep="_", field.num=2)

phraber/lassie documentation built on May 25, 2019, 6:01 a.m.