ordfn: Nonmetric multidimensional scaling helper

In phytomosaic/foggy: Species and Trait Responses to Fog Gradients

Description

Light wrapper around metaMDS with some pre-specified arguments.

Usage

ordfn(spe, distance, k, ...)

Arguments

spe	species abundance matrix
distance	dissimilarity index, per vegdist
k	number of ordination axes sought
...	additional arguments passed to metaMDS

Details

Very light wrapper around metaMDS.

Value

Object of class metaMDS.

See Also

metaMDS

Examples

data(veg) # load('./data/veg.rda', verbose=T)
spe <- veg$spe
(m <- ordfn(spe, dist='bray', k=2))
plot(m)

phytomosaic/foggy documentation built on Nov. 5, 2019, 12:20 a.m.