plotThresholds: plotThresholds
In plger/scDblFinder: scDblFinder
plotThresholds R Documentation
plotThresholds
Description
Plots scores used for thresholding.
Usage
plotThresholds(d, ths = (0:100)/100, dbr = NULL, dbr.sd = NULL, do.plot = TRUE)
Arguments
d
A data.frame of cell properties, with each row representing a cell,
as produced by 'scDblFinder(..., returnType="table")'.
ths
A vector of thresholds between 0 and 1 at which to plot values.
dbr
The expected (mean) doublet rate.
dbr.sd
The standard deviation of the doublet rate, representing the
uncertainty in the estimate.
do.plot
Logical; whether to plot the data (otherwise will return the
underlying data.frame).
Value
A ggplot, or a data.frame if 'do.plot==FALSE'.
plger/scDblFinder documentation built on June 19, 2024, 3:34 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| plotThresholds | R Documentation |
plotThresholds
Description
Plots scores used for thresholding.
Usage
plotThresholds(d, ths = (0:100)/100, dbr = NULL, dbr.sd = NULL, do.plot = TRUE)
Arguments
d |
A data.frame of cell properties, with each row representing a cell, as produced by 'scDblFinder(..., returnType="table")'. |
ths |
A vector of thresholds between 0 and 1 at which to plot values. |
dbr |
The expected (mean) doublet rate. |
dbr.sd |
The standard deviation of the doublet rate, representing the uncertainty in the estimate. |
do.plot |
Logical; whether to plot the data (otherwise will return the underlying data.frame). |
Value
A ggplot, or a data.frame if 'do.plot==FALSE'.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.