README.md
In plger/sechm: sechm: Complex Heatmaps from a SummarizedExperiment
sechm
Pierre-Luc Germain, 08.04.2021
D-HEST Institute for Neurosciences, ETH Zürich & Laboratory of Statistical Bioinformatics, University Zürich
The sechm package is essentially a convenient wrapper around the
ComplexHeatmap
engine, facilitating the creation of heatmaps from
SummarizedExperiment
objects. This was formerly part of the SEtools package.
Install with:
BiocManager::install("plger/sechm")
Example usage:
sechm(SE, features=myGenes, top_annotation="Time", do.scale=TRUE, gaps_at="Condition",
mark=c("Gm14288","Fos","Arc"))
See the package's vignette for more information!
plger/sechm documentation built on June 16, 2024, 7:53 a.m.
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sechm
Pierre-Luc Germain, 08.04.2021
D-HEST Institute for Neurosciences, ETH Zürich & Laboratory of Statistical Bioinformatics, University Zürich
The sechm package is essentially a convenient wrapper around the ComplexHeatmap engine, facilitating the creation of heatmaps from SummarizedExperiment objects. This was formerly part of the SEtools package.
Install with:
BiocManager::install("plger/sechm")
Example usage:
sechm(SE, features=myGenes, top_annotation="Time", do.scale=TRUE, gaps_at="Condition",
mark=c("Gm14288","Fos","Arc"))
See the package's vignette for more information!
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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