getDEA: getDEA

View source: R/misc.R

getDEAR Documentation

getDEA

Description

Extracts (standardized) DEA results from the rowData of an SE object.

Usage

getDEA(se, dea = NULL, homogenize = FALSE)

Arguments

se

A SummarizedExperiment-class, with DEAs each saved as a rowData column of 'se', with the column name prefixed with "DEA."

dea

The optional name of the DEA to extract

homogenize

Logical; whether to homogenize the DEA

Value

The DEA data.frame if 'dea' is given, otherwise a named list of data.frames.

Examples

# loading example SE
data("Chen2017", package="sechm")
# this ones doesn't have saved DEAs in the standard format:
getDEA(Chen2017)

plger/sechm documentation built on Nov. 21, 2023, 8:53 p.m.