glPlotStat: Box plot for Minimal Effective Concentrations (MEC) and AC50...

In pmpsa-hpc/GladiaTOX: R Package for Processing High Content Screening data

Box plot for Minimal Effective Concentrations (MEC) and AC50 plot

Description

This function plots MEC values

Usage

glPlotStat(asid, ref.chm = NULL, stat = quote(modl_acc))

Arguments

asid	Assay source id
ref.chm	Chemical to adopt as reference
stat	Character vector of statistic to export

Details

This function is useful to show the MEC trend over control chemical

Value

A list of ggplot objects, one per assay X timepoint.

Examples

## Store the current config settings, so they can be reloaded at the end
## of the examples
conf_store <- gtoxConfList()
gtoxConfDefault()

## Create boxplot of MEC
## plots in a pdf file.
pp <- glPlotStat(asid = 1L)
pp[[1]]

## Reset configuration
options(conf_store)

pmpsa-hpc/GladiaTOX documentation built on Sept. 1, 2023, 5:52 p.m.