Man pages for poissonconsulting/jaggernaut
Bayesian Analyses using 'JAGS'
| add_jags | Add JAGS objects |
| as.jags_model | Coerce to a JAGS model object |
| auto_corr | Get auto-correlation values (s) |
| coef.jags_analysis | Calculate parameter estimates |
| coef.jags_sample | Coefficients |
| combine | Combines objects |
| combine.jags_model | Add JAGS model objects |
| combine.jags_sample | Combine JAGS samples |
| combine_list | Combines elements of list |
| convergence | Get R-hat value(s) |
| convergence_analyses | Combine Models |
| convergence_threshold | R-hat threshold |
| conversion_terms | Conversion Terms |
| convert_data | Convert Data |
| cross_corr | Get cross-correlation values |
| data_jags | Get dataset(s) from a JAGS object |
| dataset | Get dataset(s) from a JAGS object |
| dataset.jags_analysis | Get dataset from a JAGS analysis object |
| dataset.jags_sample | Get dataset |
| date2integer | Date To Integer |
| ddply_jags_sample | ddply JAGS sample |
| default_model_id | Get default model id |
| default_model_id-set | Set model name(s) |
| derived_code | Get derived code from a JAGS object |
| derived_code-set | Set derived code in a JAGS object |
| falcon | Falcon breeding population data |
| fitted.jags_analysis | JAGS analysis fitted values |
| generate_data | Generate data |
| gen_inits | Get generate initial values |
| gen_inits-set | Set generate initial values |
| integer2date | Integer To Date |
| is_converged | Test convergence |
| is_converged.jags_analysis | Test convergence |
| is_converted_data | Test data set |
| is_converted_data_frame | Test data set |
| is_converted_data_list | Test data set |
| is_convertible_data | Test data set |
| is_convertible_data_frame | Test data frame |
| is_convertible_data_list | Test convertible data list |
| is.jags_analysis | Test for objects of class jags_analysis |
| is.jags_model | Test for objects of class jags_model |
| is.jags_sample | Test for objects of class jags_sample |
| is_parallel | Test parallel |
| jaggernaut | Bayesian Analysis with JAGS |
| jags_analysis | Perform a JAGS analysis |
| jags_model | Create a JAGS model |
| jg_block_names | Get block names in JAGS model code |
| jg_block_names-set | Set block names in JAGS model code |
| jg_blocks | Parses blocks in JAGS model code |
| jg_check | Check JAGS model code |
| jg_dists | Get distributions in JAGS model code |
| jg_fix | Fix JAGS model code |
| jg_funcs | Get functions in JAGS model code |
| jg_nblock | Get number of blocks in JAGS model code |
| jg_rm_comments | Remove comments in JAGS model code |
| jg_vnodes | Get variable nodes in JAGS model code |
| merge_jags_samples | Merge JAGS samples |
| model | Get model |
| model_code | Get model code |
| model_code-set | Set model code |
| model_id | Get model id |
| model_id-set | Set model name(s) |
| modify_data | Get modify data |
| modify_data_derived | Get modify data derived |
| modify_data_derived-set | Set modify data derived |
| modify_data-set | Set modify data |
| monitor | Get monitor |
| monitor-set | Set monitor |
| nanalyses | Number of analyses in a JAGS object |
| nchains | Number of MCMC chains in a JAGS object |
| new_data | New data |
| niters | Number of MCMC iterations used to generate a JAGS object |
| nmodels | Number of models in a JAGS object |
| nsamples | Number of MCMC samples in a JAGS object |
| ntries | Get number of tries |
| opts_jagr | Get and set jaggernaut options |
| paste_names | Paste Names |
| plot.jags_analysis | Plot a JAGS analysis |
| predictive_check | JAGS analysis posterior predictive checks |
| predict.jags_analysis | Predict |
| random_effects | Get random effects |
| random_effects-set | Set random effects |
| residuals.jags_analysis | Residuals |
| reverse_strings | Reverse Strings |
| select_data | Get select data |
| select_data_derived | Get select derived |
| select_data_derived-set | Set modify data derived |
| select_data-set | Set select_data |
| subset.jags_analysis | Subset a JAGS analysis |
| subset.jags_model | Subset a JAGS model |
| test_examples | Test Examples |
