clusterNames: Get names of clustering runs.

View source: R/cluster.R

clusterNamesR Documentation

Get names of clustering runs.

Description

Get names of clustering runs.

Usage

clusterNames(se)

Arguments

se

A SpatialExperiment, SingleCellExperiment or SummarizedExperiment object with clusterBanksy ran.

Value

A character vector of names of clustering runs.

Examples

data(rings)
spe <- computeBanksy(rings, assay_name = "counts", M = 1, k_geom = c(15, 30))
spe <- runBanksyPCA(spe, M = 1, lambda = c(0, 0.2), npcs = 20)
spe <- clusterBanksy(spe, M = 1, lambda = c(0, 0.2), resolution = 1)
clusterNames(spe)


prabhakarlab/Banksy documentation built on July 31, 2024, 7:37 p.m.