mean_comparisons.check_model_GxE: Get mean comparisons from 'check_model.fit_model_GxE' object

In priviere/PPBstats: An R package to perform analysis found within PPB programmes

Description

mean_comparisons performs mean comparisons from object coming from check_model.fit_model_GxE

Usage

## S3 method for class 'check_model_GxE'
mean_comparisons(x, alpha = 0.05,
  p.adj = "none", ...)

Arguments

x	outputs from check_model.fit_model_GxE
alpha	level of type one error. 0.05 (5%) by default
p.adj	For all except type = 2. NULL for no adjustement of the type one error. p.adj can "holm", "hochberg", "bonferroni", "BH", "BY" or "fdr" p-adj = "none" is t-student. See p.adjust() for more details.
...	further arguments passed to or from other methods

Details

S3 method. See in the book for more details here

Value

A list of four elements :

• info : a list with variable and gxe_analysis

• data_ggplot_LSDbarplot_germplasm

• data_ggplot_LSDbarplot_location

• data_ggplot_LSDbarplot_year

Author(s)

Pierre Riviere

See Also

• mean_comparisons

• plot.PPBstats

• plot.mean_comparisons_model_GxE

priviere/PPBstats documentation built on May 6, 2021, 1:20 a.m.