compute.selection.table: Applies an FDR threshold on a table of adjusted p-values and...

View source: R/anova_analysis.R

compute.selection.tableR Documentation

Applies an FDR threshold on a table of adjusted p-values and summarizes the results

Description

Applies an FDR threshold on a table of adjusted p-values and summarizes the results

Usage

compute.selection.table(x, fdr.threshold)

Arguments

x

a table of adjusted p-values

fdr.threshold

an FDR threshold

Value

a summary of the number of significantly differentially abundant proteins, overall and per contrast

Author(s)

Thomas Burger

Examples

data(Exp1_R25_prot, package='DAPARdata')
exdata <- Exp1_R25_prot[1:5,]
adjpvaltab <- globalAdjPval(testAnovaModels(applyAnovasOnProteins(exdata), "TukeyHSD")$P_Value)
seltab <- compute.selection.table(adjpvaltab, 0.2)
seltab


prostarproteomics/DAPAR documentation built on Oct. 11, 2024, 12:03 p.m.