extract_icd_codes: Function to get ICD data for calculating elixhauser scores

In pwatrick/DrugRepurposingToolKit: A High-Throughput Approach Integrating Gene Expression Signatures and Clinical Data to Repurpose Drugs

Function to get ICD data for calculating elixhauser scores

Description

extract_icd_codes extracts ICD codes for calculating Elixhauser comorbidity scores.

Usage

extract_icd_codes(
  drug_concept_id,
  biomarker_concept_id,
  table_name,
  table_type,
  elix_icds
)

Arguments

drug_concept_id	A string
biomarker_concept_id	A string
table_name	A string
table_type	A string, either c("covariates", "drugs", "biomarkers", "icds")
elix_icds	A string

Details

This function extracts ICD codes for calculating Elixhauser comorbidity scores.

Updated: 2021-10-05

pwatrick/DrugRepurposingToolKit documentation built on Aug. 10, 2024, 7:12 a.m.