nm_unzip: Unzip a NONMEM File

In qPharmetra/qpToolkit: qPharmetra R Tools

Unzip a NONMEM File

Description

Unzips a NONMEM file, by default the xml output of a NONMEM run. Uses 7z decompression.

Usage

nm_unzip(
  run,
  extension = ".xml",
  filename = paste0(run, fxs(extension, ".   ")),
  path = file.path(normalizePath(getOption("nmDir", getwd())), run),
  tmpdir = tempdir(),
  temp = FALSE,
  outdir = ifelse(temp, tmpdir, path),
  zip.filename = file.path(path, filename),
  zip.call = getOption("unzip.call"),
  quiet = TRUE,
  ...
)

Arguments

run	character (run name)
extension	character: extension to append to run
filename	character: supersedes run, extension
path	path to directory enclosing the NONMEM run directory
outdir	character: one of path or tempdir
zip.call	character: system unzip invocation
tempdir	character: path to temporary working directory if temp is true
temp:	whether to unzip to a temporary directory
zip.filename:	character: path and source filename, supersedes extension, filename, and path

qPharmetra/qpToolkit documentation built on May 24, 2023, 8:52 a.m.