process.parTable: Format parameter estimate table

In qPharmetra/qpToolkit: qPharmetra R Tools

Format parameter estimate table

Description

Process parameter table for inclusion into LaTeX, or MS Excel or Word

Usage

process.parTable(
  nm,
  index = 1,
  ci = 0.95,
  digits = 3,
  formatted = TRUE,
  latex = FALSE,
  align.dot = FALSE,
  transformations,
  Descriptor,
  plain = FALSE,
  missing.format = ".....",
  remove.fixed.sigma = FALSE
)

Arguments

nm	output from nm.params.table
index	which estimation (only relevant in case of multiple $EST)
ci	confidence interval for 95% CI
digits	number of significant digits in output
formatted	whether to enforce length of significant digits, see formatted.signif
latex	passed to formatted.signif
align.dot	passed to formatted.signif
transformations	a list with elements log or logit, that, in turn, are numeric vectors representating the THETA numbers that are logged or logit-transformed, respectively.
Descriptor	vector of descriptor (alias) names for numbered parameter estimates. For example c("CL","V1","SD(CL)","cor(CL,V1)","SD(V1)","prop. residual var.")
plain	logical (defaults to F) indicating if LaTeX formatting of the table should be skipped, allowing the result to be easily available for Microsoft products.
missing.format	what to replace non-estimated / fixed parameter estimates, or
remove.fixed.sigma	logical option to remove sigma estimates from the table

Value

Either a LaTeX preformatted parameter estimate table (default) or a fully processed parameter estimate table without LaTeX preformatting (for inclusion into Microsoft products).

See Also

nm.params.table, process.runrec

Examples

process.parTable(
   nm = nm.params.table(run = "example1", path = getOption("qpExampleDir"), runIndex = 1)
 , transformations = list(log = c(1:12))
 , missing.format = "...."
)
process.parTable(
   nm = nm.params.table(run = "example1", path = getOption("qpExampleDir"))
 , transformations = list(logit = c(7,9))
 , plain = TRUE
 , missing.format = "...."
)
process.parTable(
   nm = nm.params.table(run = "example1", path = getOption("qpExampleDir"))
 , transformations = list(logit = c(7,9))
 , plain = TRUE
 , formatted = FALSE
 , missing.format = "...."
)

qPharmetra/qpToolkit documentation built on May 24, 2023, 8:52 a.m.