read.ext: Parse the information from the .ext file

In qPharmetra/qpToolkit: qPharmetra R Tools

Parse the information from the .ext file

Description

Read and parse the information embedded in the .ext file from a completed NONMEM run. In case of multiple $EST calls, these will be parsed one by one and included with their respective $EST names into the resulting list

Usage

read.ext(run, path = getOption("nmDir"), file.ext = ".ext", quiet = TRUE)

Arguments

run	run rootname (e.g. run1)
path	directory where run resides
file.ext	file extension of the .ext file
quiet	if TRUE no message will be returned. #' @return A list with data.frames (as many as there where $EST calls in the NONMEM control stream) containing the .ext output

See Also

read.out

Examples

read.ext(run = "example1", path = getOption("qpExampleDir"))
## now parse an output where multiple $EST calls have been performed
read.ext(run = "example1", path = getOption("qpExampleDir"), file.ext = ".mext")
## a large one
read.ext(run = "example1", path = getOption("qpExampleDir"))

qPharmetra/qpToolkit documentation built on May 24, 2023, 8:52 a.m.