Regions-class: The Regions class
In quadbiolab/Pando: Inferring regulomes from multi-modal single-cell genomics data
Regions-class R Documentation
The Regions class
Description
The Regions object stores the genomic regions that are considered by the model.
It stores their genomic positions, how they map to the peaks in the Seurat object
and motif matches.
Slots
motifsA Motifs object with matches of TF motifs.
rangesA GenomicRanges object.
peaksA numeric vector with peak indices for each region.
quadbiolab/Pando documentation built on April 22, 2024, 8:14 a.m.
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| Regions-class | R Documentation |
The Regions class
Description
The Regions object stores the genomic regions that are considered by the model. It stores their genomic positions, how they map to the peaks in the Seurat object and motif matches.
Slots
motifsA
Motifsobject with matches of TF motifs.rangesA
GenomicRangesobject.peaksA numeric vector with peak indices for each region.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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