quevedor2/aneuploidy_score: Calculate the Aneuploidy Score from Chromosome Arm SCNAs/Aneuploidies
Calculates the aneuploidy score for a given tumor using the .seg file, as outlined by Shukla et al. Nature Comm 2020 paper (https://doi.org/10.1038/s41467-020-14286-0). This method looks for gains/losses of a chromosome arm, adjusts it for ploidy, and calculates the aneuploidy score.
Getting started
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Package details |
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| Maintainer | |
| License | MIT + file LICENSE |
| Version | 0.0.0.9000 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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