cytobandToArm: cytobandToArm: Reduces cytoband data to chromosome arms
In quevedor2/aneuploidy_score: Calculate the Aneuploidy Score from Chromosome Arm SCNAs/Aneuploidies
Description
Usage
Arguments
Value
Examples
View source: R/cytobandToArm.R
Description
Takes the data([CYTOBAND]) information and splits the
cytobands into their individual p-arm, q-arm or centromere positions.
Then it will reduce and clean up the data before returning it as a list
of chromosomal positions with 3 rows: 'p', 'q', and 'cen'.
Usage
1
cytobandToArm(cytoband)
Arguments
cytoband
cytoband data from data(ucsc.[GENOMEBUILD].cytoband)
Value
List of chromosome arms and their arm-level coordinates in dataframes
Examples
1
2
quevedor2/aneuploidy_score documentation built on Feb. 26, 2021, 12:13 p.m.
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Description Usage Arguments Value Examples
View source: R/cytobandToArm.R
Description
Takes the data([CYTOBAND]) information and splits the cytobands into their individual p-arm, q-arm or centromere positions. Then it will reduce and clean up the data before returning it as a list of chromosomal positions with 3 rows: 'p', 'q', and 'cen'.
Usage
1 | cytobandToArm(cytoband)
|
Arguments
cytoband |
cytoband data from data(ucsc.[GENOMEBUILD].cytoband) |
Value
List of chromosome arms and their arm-level coordinates in dataframes
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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