load_runprm: Load Atlantis '_run.prm' file

In r4atlantis/atlantisom: Generates Data Sets From Atlantis Scenarios

Load Atlantis _run.prm file

Description

This function loads the Atlantis run parameter output file.

Usage

load_runprm(dir = getwd(), file_runprm)

Arguments

dir

The directory of the atlantis model output, where the default is getwd().

file_runprm

A character value giving the file name of the biology .xml file. The file should be located in your current working directory or the folder you specify in dir. The argument can also be specified as the full path name, just as long as argument dir is specified as NULL. Usually the file is named "[...]_run.xml".. This file is output from an Atlantis run in a standard format and is based on input from the "[...]_run.prm" file.

Value

A list of parameters dictating run characteristics from the _run.xml file.

Author(s)

Emma E Hodgson, Kelli Faye Johnson

See Also

Other load functions: load_agebioind(), load_bioind(), load_biolprm(), load_boxarea(), load_box(), load_bps(), load_catch(), load_detailed_diet_comp(), load_diet_comp(), load_fgs(), load_fisheries(), load_meta(), load_nc_annage(), load_nc_catchtons(), load_nc(), load_yoy()

Examples

d <- system.file("extdata", "SETAS_Example", package = "atlantisom")
runprm <- load_runprm(d, "Run_settings.xml")
rm(runprm)

r4atlantis/atlantisom documentation built on Nov. 12, 2023, 2:59 a.m.