API for r4atlantis/atlantisom
Generates Data Sets From Atlantis Scenarios

Global functions
SS_write_EWAA	Man page Source code
SS_write_biol	Man page Source code
SS_write_comps	Man page Source code
SS_write_ts	Man page Source code
aggregateData	Man page Source code
aggregateDensityData	Man page Source code
aggregate_comps	Man page Source code
calc_Z	Man page Source code
calc_age2length	Man page Source code
calc_avgwtstage2age	Man page Source code
calc_biomass_age	Man page Source code
calc_biomass_pool	Man page Source code
calc_pred_cons	Man page Source code
calc_pred_diet	Man page Source code
calc_stage2age	Man page Source code
calc_timestep2time	Man page Source code
create_fishery_subset	Man page Source code
create_survey	Man page Source code
create_survey_diet	Man page Source code
create_survey_env	Man page Source code
get_boundary	Man page Source code
load_agebioind	Man page Source code
load_bioind	Man page Source code
load_biolprm	Man page Source code
load_box	Man page Source code
load_boxarea	Man page Source code
load_bps	Man page Source code
load_catch	Man page Source code
load_detailed_diet_comp	Man page Source code
load_diet_comp	Man page Source code
load_fgs	Man page Source code
load_fisheries	Man page Source code
load_meta	Man page Source code
load_nc	Man page Source code
load_nc_annage	Man page Source code
load_nc_catchtons	Man page Source code
load_nc_physics	Man page Source code
load_runprm	Man page Source code
load_yoy	Man page Source code
om_comps	Man page Source code
om_consindex	Man page Source code
om_diet	Man page Source code
om_index	Man page Source code
om_init	Man page Source code
om_species	Man page Source code
read_savedfisheries	Man page Source code
read_savedsurvs	Man page Source code
read_xml_atlantis	Source code
reformat_compositions	Man page Source code
run_stocksynthesis	Man page Source code
run_truth	Man page Source code
sample_ages	Man page Source code
sample_diet	Man page Source code
sample_fish	Man page Source code
sample_fishery_totcatch	Man page Source code
sample_survey_biomass	Man page Source code
sample_survey_consumption	Man page Source code
sample_survey_numbers	Man page Source code
str_split_twice	Source code
write_SS_ctl	Man page Source code
write_SS_dat	Man page Source code
write_meta	Man page Source code