Files in radamsRHA/Misc.Statistics.Genetics.Models

.DS_Store

.Rbuildignore

.gitignore

DESCRIPTION

Misc.Statistics.Genetics.Models.Rproj

NAMESPACE

R/AncestralCoal.R R/CVOS.ThetaMater.R R/Calculate.PI.PairwiseDistance.pyRAD.Alleles.R R/Calculate.S.PyRAD.Alleles.R R/Calculate.TajimasD.PyRAD.Alleles.R R/CoalSelectSim.R R/Coalescent.StandardModel.2.R R/CoalescentSim.EXAMPLE.R R/CoalescentSimulation.1.R R/CoalescentSimulations1..R R/Compute.Bootstrap.Variances.R R/Compute.CoalescentStats copy.R R/Compute.CoalescentStats.R R/Compute.Genetic.Distances.Functions.R R/Compute.Model.MutationRate.R R/Compute.Number.Of.Descendants.R R/Compute.Tmrca.R R/Example.Bayesian.Structure.R R/Example.MCMC.R R/GTR.R R/GeometricDistribution.R R/JC60Models.R R/JC69.R R/K80.R R/K80Model.R R/Kingman1982.R R/MCMC_JC69.R R/MLEModels.R R/MarkovModels.2.R R/MarkovModels.Wakley.R R/Matrix.Q.Decomposition.R R/Model.Binomial.1.R R/Model.BirthDeath.R R/Model.Exponential.Poisson.Wakeley.R R/Model.HKY.Derivation.R R/Model.JC69.2.R R/Model.NucleotideSubstitution.Derivation.R R/Model.Poisson.Process.R R/Model.Poisson.Process2.Wakeley.R R/Model.Test.RelativeRate.R R/ModelRelaxed.Clock.R R/Models.FundamentalStats.Wakeley.Chp2.R R/Models.Markov.Yang.Chp1.R R/Models.Morpho.Matrices.R R/Models.Population.Migration.R R/Nucleotide.Model.Q.Parameterize.R R/Paup.Maker.R R/ProbFunctionsMRCA.R R/Read.Directory.PhylipFiles.R R/Read.PyRAD.Alleles.2.R R/Read.PyRAD.Alleles1.2.R R/Sim.Coalscent.PopChange.R R/Simulate.Yule.Model.R R/Simulation.Coalescent.3.R R/Simulation.Coalescent2.R R/Simulation.Mulispecies.R R/Simulation.Multispecies.Selection.Sequence.R R/Simulation.PopulationModel.WF.R R/Simulation.Selection.2.R R/StatisticalTest.NucleotideSub.R R/SubSet.Tree.R R/Summarize.FST.Results.SelectionMSC.R R/TN93.R R/ThetaLike.CVOS.R R/ThetaMater.MLE.R R/TreeSummary.R R/WF.Lnl_20Feb2019.R R/Wakely.Coalescent.Chp1.R R/simSeqfromSp2.R README.md Rplots.pdf man/Calculate.PI.PairwiseDistance.pyRAD.Alleles.Rd man/Calculate.S.PyRAD.Alleles.Rd man/Calculate.TajimasD.PyRAD.Alleles.Rd man/Read.Directory.PhylipFiles.Rd man/Read.PyRAD.Alleles.2.Rd man/Read.PyRAD.Alleles1.Rd man/simSeqfromSp2.Rd

radamsRHA/Misc.Statistics.Genetics.Models documentation built on May 5, 2019, 6:56 p.m.