Files in radamsRHA/ThetaMater
ThetaMater: Bayesian estimation of the population size parameter theta from genomic data
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/.DS_Store
R/Coal.Theta.Sim.File.G.R
R/Coal.Theta.Sim.File.R
R/Coal.Theta.Sim.R
R/Compute.RateAVG.R
R/FilterData.PPS.R
R/RcppExports.R
R/Read.AllelesFile.R
R/Read.DiploidFasta.R
R/Read.FastaDir.R
R/Read.InterleavedFasta.R
R/Read.NexusDir.R
R/ThetaMater.M0.R
R/ThetaMater.M1.R
R/ThetaMater.M2.R
R/ThetaMater.M3.R
R/ThetaMater.PPS.R
README.md
data/.DS_Store
data/example.M2.dat.rda
data/example.MCMC.M2.M2.rda
data/example.MCMC.M2.rda
data/example.MCMC.M3.rda
data/example.MCMC.PostFilter.rda
data/example.MCMC.SequenceError.rda
data/example.SeqError.alles.rda
data/example.dat.rda
data/example.locus10.mcmc.rda
data/example.locus100.mcmc.rda
data/example.locus1000.mcmc.rda
data/example.locus10000.mcmc.rda
data/example.r4.MCMC.rda
data/example.r5.MCMC.rda
data/example.r6.MCMC.rda
data/example.r7.MCMC.rda
data/example.r8.MCMC.rda
data/example.r9.MCMC.rda
inst/.DS_Store
inst/example.MCMC.M1.csv
inst/example.alleles
man/.DS_Store
man/Coal.Theta.Sim.File.G.Rd
man/Coal.Theta.Sim.File.Rd
man/Coal.Theta.Sim.Rd
man/Compute.RateAVG.R.Rd
man/FilterData.PPS.Rd
man/Read.AllelesFile.Rd
man/Read.DiploidFasta.Rd
man/Read.FastaDir.Rd
man/Read.InterleavedFasta.Rd
man/Read.NexusDir.Rd
man/ThetaDataLike.Rd
man/ThetaDataLikeGamma.Rd
man/ThetaMater.M0.Rd
man/ThetaMater.M1.Rd
man/ThetaMater.M2.Rd
man/ThetaMater.M3.Rd
man/ThetaMater.PPS.Rd
src/.DS_Store
src/RcppExports.cpp
src/ThetaDataLike.cpp
src/ThetaDataLikeGamma.cpp
vignettes/Adams_2018.pdf
vignettes/SimulateChr1.v2.py
vignettes/ThetaMater_Tutorial.html
vignettes/ThetaMater_Tutorial.md
vignettes/ThetaMater_Tutorial.pdf
