Files in radamsRHA/ThetaMater

ThetaMater: Bayesian estimation of the population size parameter theta from genomic data

.DS_Store

.Rbuildignore

.gitignore

DESCRIPTION

NAMESPACE

R/.DS_Store

R/Coal.Theta.Sim.File.G.R R/Coal.Theta.Sim.File.R R/Coal.Theta.Sim.R R/Compute.RateAVG.R R/FilterData.PPS.R R/RcppExports.R R/Read.AllelesFile.R R/Read.DiploidFasta.R R/Read.FastaDir.R R/Read.InterleavedFasta.R R/Read.NexusDir.R R/ThetaMater.M0.R R/ThetaMater.M1.R R/ThetaMater.M2.R R/ThetaMater.M3.R R/ThetaMater.PPS.R README.md

data/.DS_Store

data/example.M2.dat.rda

data/example.MCMC.M2.M2.rda

data/example.MCMC.M2.rda

data/example.MCMC.M3.rda

data/example.MCMC.PostFilter.rda

data/example.MCMC.SequenceError.rda

data/example.SeqError.alles.rda

data/example.dat.rda

data/example.locus10.mcmc.rda

data/example.locus100.mcmc.rda

data/example.locus1000.mcmc.rda

data/example.locus10000.mcmc.rda

data/example.r4.MCMC.rda

data/example.r5.MCMC.rda

data/example.r6.MCMC.rda

data/example.r7.MCMC.rda

data/example.r8.MCMC.rda

data/example.r9.MCMC.rda

inst/.DS_Store

inst/example.MCMC.M1.csv

inst/example.alleles

man/.DS_Store

man/Coal.Theta.Sim.File.G.Rd man/Coal.Theta.Sim.File.Rd man/Coal.Theta.Sim.Rd man/Compute.RateAVG.R.Rd man/FilterData.PPS.Rd man/Read.AllelesFile.Rd man/Read.DiploidFasta.Rd man/Read.FastaDir.Rd man/Read.InterleavedFasta.Rd man/Read.NexusDir.Rd man/ThetaDataLike.Rd man/ThetaDataLikeGamma.Rd man/ThetaMater.M0.Rd man/ThetaMater.M1.Rd man/ThetaMater.M2.Rd man/ThetaMater.M3.Rd man/ThetaMater.PPS.Rd

src/.DS_Store

src/RcppExports.cpp

src/ThetaDataLike.cpp

src/ThetaDataLikeGamma.cpp

vignettes/Adams_2018.pdf

vignettes/SimulateChr1.v2.py

vignettes/ThetaMater_Tutorial.html

vignettes/ThetaMater_Tutorial.md vignettes/ThetaMater_Tutorial.pdf

radamsRHA/ThetaMater documentation built on April 25, 2024, 10:11 a.m.