plotSignatures: Plots the result from whichSignatures()

In raerose01/deconstructSigs: Identifies Signatures Present in a Tumor Sample

Description

Uses the output from whichSignatures() and creates a plot of the given tumor mutational spectrum and the calculated one

Usage

plotSignatures(sigs.output, sig.type = "SBS", sub = "")

Arguments

sigs.output	The list output from whichSignatures()
sig.type	Are SBS or DBS signatures of interest?
sub	A character vector that specifies cancer subtype for plot title, if wanted

Value

Plots the trinucleotide frequency for the given tumor on the top panel, the calculated one on the middle panel, and the difference between the two on the bottom panel.

Examples

plotSignatures(example.output, sub = "example", sig.type = 'SBS')

raerose01/deconstructSigs documentation built on Aug. 20, 2020, 11:44 a.m.