Description Usage Arguments Value
Store the new dimension transformed data and cluster data into the exprs
matrix in new fcs files under analyzedFCSdir
1 2 3 4 |
data |
The new data matrix to be added in. |
rawFCSdir |
The directory containing the original fcs files. |
origSampNames |
Vector of original names of samples, if samples were renamed. |
analyzedFCSdir |
The directory to store the new fcs files. |
transformed_cols |
The column name of the dimension transformed data in |
cluster_cols |
The column name of the cluster data in |
clusterIDs |
Table of cell cluster IDs for each clustering method |
specifySampleNames |
Used only if sample names differ from those in raw fcs. |
inLgclTrans |
If |
New fcs files stored under analyzedFCSdir
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