Description Usage Arguments Details Examples
This function tests for alternative splicing.
1 2 | test.multiple(Y, X, map, w.type = NULL, spec = 1, min = 100,
steps = 20)
|
Y |
exon expression: matrix with n rows (samples) and p columns (exons) |
X |
SNP genotype: matrix with n rows (samples) and q columns (SNPs) |
map |
list with names "genes", "exons", and "snps"
(output from |
w.type |
string:
if |
spec |
number of cores: positive integer |
min |
minim chunk size: positive integer |
steps |
number of iteration chunks: positive integer |
Automatic adjustment of the number of permutations such that Bonferroni-significant p-values are possible.
1 |
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