plot_alphaDiversity_milkType_association: Create boxplots of alpha diversity and milk consumption type

In rbarner/infantMilkConsumption: Create statistical tables and plots used in manuscript "Formula with Added Sugars Significantly Alters Gut Microbiota and Cognitive Development in Hispanic Infants"

Description

This function will output the a boxplot of means of alpha diversity of gut microbiota across milk consumption types at 6-months of age.

Usage

plot_alphaDiversity_milkType_association(variable = "shannonDiversity",variableName = "Shannon Diversity")

Arguments

variable	Diversity index to be plotted. Options are "shannonDiversity","simpsonDiversity","richness","evenness","numSeqPerSample"
variableName	Name of diversity index to be plotted. Options are "Shannon Diversity","Simpson Diversity","Richness","Evenness","Number of Sequences Per Sample"

Author(s)

Roshonda B. Jones

Examples

plot_alphaDiversity_milkType_association()
plot_alphaDiversity_milkType_association(variable = "simpsonDiversity",variableName = "Simpson Diversity")

rbarner/infantMilkConsumption documentation built on Nov. 19, 2019, 12:36 a.m.