Man pages for rcastelo/GSVA
Gene Set Variation Analysis for Microarray and RNA-Seq Data
| computeGeneSetsOverlap | Compute gene-sets overlap |
| deduplicateGeneSets | Handling of Duplicated Gene Set Names |
| filterGeneSets | Filter gene sets |
| geneIdsToGeneSetCollection | Construct a GeneSetCollection object from a list of character... |
| geneSets | Retrieve or Determine Gene Sets |
| gsva | Gene Set Variation Analysis |
| gsvaAnnotation | Store and Retrieve Annotation Metadata |
| gsva-defunct | Gene Set Variation Analysis |
| gsvaEnrichment | GSVA enrichment data and visualization |
| GsvaExprData-class | 'GsvaExprData' class |
| GsvaGeneSets-class | 'GsvaGeneSets' class |
| GsvaMethodParam-class | 'GsvaMethodParam' class |
| gsvaParam-class | 'gsvaParam' class |
| GSVA-pkg-defunct | Defunct functions in package 'GSVA'. |
| GSVA-pkg-deprecated | Deprecated functions in package 'GSVA'. |
| gsvaRanks | GSVA ranks and scores |
| guessGeneIdType | Guess the gene identifier type from a list of character... |
| igsva | Gene Set Variation Analysis |
| plageParam-class | 'plageParam' class |
| readGMT | Import Gene Sets from a GMT File |
| spatCor | Compute Spatial Autocorrelation for SpatialExperiment objects |
| ssgseaParam-class | 'ssgseaParam' class |
| zscoreParam-class | 'zscoreParam' class |
